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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs13141065 chr4:110744366 G/A 0.000137 480 16.57 15.4 14.47 KM Plot
THCA rs1314673 chr14:59701942 C/G 2.57E-8 486 16.07 14.9 5.1 KM Plot
THCA rs13150241 chr4:3367281 A/G 7.81E-6 481 11.78 15.18 16.87 KM Plot
THCA rs13150454 chr4:110756211 A/G 0.000144 472 16.47 16.23 14.55 KM Plot
THCA rs13165095 chr5:81196253 G/A 0.000277 486 15.93 14.95 27.82 KM Plot
THCA rs13180985 chr5:81227014 A/G 0.00024 488 15.9 15 27.82 KM Plot
THCA rs1318692 chr12:49297785 A/G 0.000313 485 16.8 16.2 13.93 KM Plot
THCA rs13193847 chr6:99472547 G/A 1.79E-5 489 15.32 19.17 25.13 KM Plot
THCA rs13195046 chr6:99332734 T/C 2.17E-5 489 15.63 18.77 25.13 KM Plot
THCA rs1320041 chr11:7411652 C/T 3.49E-5 490 16.23 14.8 21.98 KM Plot
THCA rs13202443 chr6:99319633 A/G 1.98E-5 490 15.63 18.45 25.13 KM Plot
THCA rs13206505 chr6:99333489 G/A 2.17E-5 489 15.63 18.77 25.13 KM Plot
THCA rs13208107 chr6:99335860 T/C 2.17E-5 489 15.63 18.77 25.13 KM Plot
THCA rs13209856 chr6:99326498 T/C 2.16E-5 490 15.48 18.77 25.13 KM Plot
THCA rs13209858 chr6:99306101 G/A 2.19E-5 487 15.67 18.77 25.13 KM Plot